Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm12458-201ENSMUST00000119387 495 ntBASIC6.27□□□□□ -1.41
Cux1P53564 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cux1P53564 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cux1P53564 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC6.27□□□□□ -1.41
Cux1P53564 Gm43039-201ENSMUST00000202883 963 ntBASIC6.27□□□□□ -1.41
Cux1P53564 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC6.27□□□□□ -1.41
Cux1P53564 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cux1P53564 Gm10704-201ENSMUST00000098952 730 ntBASIC6.27□□□□□ -1.41
Cux1P53564 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cux1P53564 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cux1P53564 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cux1P53564 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Gm15018-201ENSMUST00000117090 633 ntBASIC6.26□□□□□ -1.41
Cux1P53564 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cux1P53564 Gm22320-201ENSMUST00000157149 312 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Gm23082-201ENSMUST00000157852 133 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cux1P53564 Gm5066-201ENSMUST00000188479 822 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Gm37300-201ENSMUST00000193327 280 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Gm7299-201ENSMUST00000194441 581 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cux1P53564 Gm18487-201ENSMUST00000215826 878 ntBASIC6.26□□□□□ -1.41
Cux1P53564 AC129202.3-201ENSMUST00000224413 733 ntBASIC6.26□□□□□ -1.41
Cux1P53564 CT010511.1-201ENSMUST00000224570 315 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Vmn1r89-206ENSMUST00000227319 985 ntBASIC6.26□□□□□ -1.41
Cux1P53564 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cux1P53564 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cux1P53564 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cux1P53564 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Cux1P53564 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cux1P53564 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cux1P53564 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cux1P53564 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Cux1P53564 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Cux1P53564 Gm15902-202ENSMUST00000219623 3477 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cux1P53564 Defa-ps9-201ENSMUST00000118264 276 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm14991-201ENSMUST00000119913 598 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm5060-201ENSMUST00000120072 599 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.25□□□□□ -1.41
Cux1P53564 Gm6058-201ENSMUST00000154261 399 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm24014-201ENSMUST00000157728 157 ntBASIC6.25□□□□□ -1.41
Cux1P53564 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cux1P53564 Gm17954-201ENSMUST00000195893 607 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC6.25□□□□□ -1.41
Cux1P53564 AC160865.1-201ENSMUST00000219873 151 ntBASIC6.25□□□□□ -1.41
Cux1P53564 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.25□□□□□ -1.41
Cux1P53564 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cux1P53564 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC6.25□□□□□ -1.41
Cux1P53564 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cux1P53564 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cux1P53564 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cux1P53564 AC152162.1-201ENSMUST00000225910 2917 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cux1P53564 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Cux1P53564 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cux1P53564 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm12379-201ENSMUST00000119607 391 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm27392-201ENSMUST00000185041 101 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm8035-201ENSMUST00000204625 687 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Gm3829-201ENSMUST00000222362 619 ntBASIC6.25□□□□□ -1.41
Cux1P53564 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.25□□□□□ -1.41
Cux1P53564 AC122397.2-201ENSMUST00000227422 686 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cux1P53564 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cux1P53564 Gm23736-201ENSMUST00000082553 75 ntBASIC6.25□□□□□ -1.41
Cux1P53564 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cux1P53564 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.24□□□□□ -1.41
Cux1P53564 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cux1P53564 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cux1P53564 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cux1P53564 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Cux1P53564 Gm13478-201ENSMUST00000118312 413 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Gm15988-201ENSMUST00000118677 367 ntBASIC6.24□□□□□ -1.41
Cux1P53564 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cux1P53564 Gm25977-201ENSMUST00000158697 85 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cux1P53564 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Gm29484-201ENSMUST00000186067 324 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Trbv28-201ENSMUST00000192804 264 ntBASIC6.24□□□□□ -1.41
Cux1P53564 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Gm6057-201ENSMUST00000195927 314 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cux1P53564 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cux1P53564 Gm23927-201ENSMUST00000082466 215 ntBASIC6.24□□□□□ -1.41
Cux1P53564 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms