Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Rfx1P48377 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Rfx1P48377 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm14731-201ENSMUST00000119216 376 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm5942-201ENSMUST00000120046 439 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm13356-201ENSMUST00000121678 335 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm12293-201ENSMUST00000121898 590 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm2020-201ENSMUST00000145242 579 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm25334-201ENSMUST00000158036 110 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm9613-201ENSMUST00000171662 196 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Rfx1P48377 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.65□□□□□ -1.34
Rfx1P48377 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm18728-201ENSMUST00000186155 753 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm37272-201ENSMUST00000193401 488 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm37336-202ENSMUST00000193705 468 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm5034-201ENSMUST00000199115 634 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Igkv11-114-201ENSMUST00000200013 346 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm29754-201ENSMUST00000206269 358 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm44611-201ENSMUST00000207507 355 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm18997-201ENSMUST00000216353 822 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm18413-201ENSMUST00000221573 655 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 AC154371.1-201ENSMUST00000226600 412 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 AC160930.1-201ENSMUST00000227194 337 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Rfx1P48377 Gm7808-201ENSMUST00000082002 387 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.65□□□□□ -1.34
Rfx1P48377 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.65□□□□□ -1.34
Rfx1P48377 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Rfx1P48377 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Rfx1P48377 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Rfx1P48377 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx1P48377 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx1P48377 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.65□□□□□ -1.35
Rfx1P48377 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Rfx1P48377 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx1P48377 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.65□□□□□ -1.35
Rfx1P48377 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Rfx1P48377 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.64□□□□□ -1.35
Rfx1P48377 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm44847-201ENSMUST00000207104 1991 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm44860-201ENSMUST00000208473 2346 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm14605-201ENSMUST00000120599 268 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm23118-201ENSMUST00000122657 187 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm23050-201ENSMUST00000158775 165 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm23872-201ENSMUST00000175432 77 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm26057-201ENSMUST00000178099 165 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm26950-201ENSMUST00000182734 498 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm27348-201ENSMUST00000184511 170 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Rfx1P48377 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm42828-201ENSMUST00000199669 469 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Rfx1P48377 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC6.64□□□□□ -1.35
Rfx1P48377 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.64□□□□□ -1.35
Rfx1P48377 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.64□□□□□ -1.35
Rfx1P48377 Gm7042-201ENSMUST00000223027 384 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms