Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Traf1P39428 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.31□□□□□ -1.56
Traf1P39428 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Traf1P39428 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Traf1P39428 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Gm16082-201ENSMUST00000115992 377 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm13733-201ENSMUST00000117290 535 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.3□□□□□ -1.56
Traf1P39428 Gm24675-201ENSMUST00000158757 259 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm23023-201ENSMUST00000158767 109 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Traf1P39428 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Traf1P39428 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC5.3□□□□□ -1.56
Traf1P39428 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.3□□□□□ -1.56
Traf1P39428 Mir6926-201ENSMUST00000184562 68 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm20177-201ENSMUST00000203705 334 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm2522-201ENSMUST00000204280 322 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm43892-201ENSMUST00000204373 265 ntBASIC5.3□□□□□ -1.56
Traf1P39428 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Traf1P39428 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Traf1P39428 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Traf1P39428 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Traf1P39428 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.3□□□□□ -1.56
Traf1P39428 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Traf1P39428 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm23942-201ENSMUST00000101956 107 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm11878-201ENSMUST00000117908 400 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm12448-201ENSMUST00000118852 655 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm15166-201ENSMUST00000120790 385 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm13000-201ENSMUST00000120937 496 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm22601-201ENSMUST00000157595 250 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm19427-201ENSMUST00000183619 208 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 Gm37684-201ENSMUST00000192779 355 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm37005-201ENSMUST00000193281 1164 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm43090-201ENSMUST00000202459 314 ntBASIC5.29□□□□□ -1.56
Traf1P39428 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.29□□□□□ -1.56
Traf1P39428 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.29□□□□□ -1.56
Traf1P39428 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm23464-201ENSMUST00000083145 147 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm24319-201ENSMUST00000083389 107 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Traf1P39428 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Traf1P39428 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.29□□□□□ -1.56
Traf1P39428 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Traf1P39428 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Traf1P39428 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm23193-201ENSMUST00000102427 82 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm24125-201ENSMUST00000104105 137 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm13009-201ENSMUST00000121307 267 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm14623-201ENSMUST00000121398 603 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms