Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mir370-201ENSMUST00000083499 79 ntBASIC4.69□□□□□ -1.66
Col2a1P28481 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col2a1P28481 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col2a1P28481 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Col2a1P28481 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col2a1P28481 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col2a1P28481 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.68□□□□□ -1.66
Col2a1P28481 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col2a1P28481 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col2a1P28481 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col2a1P28481 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col2a1P28481 Gm23271-201ENSMUST00000104052 124 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Gm11718-201ENSMUST00000119942 537 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Gm15022-201ENSMUST00000122074 746 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Gm11281-201ENSMUST00000141391 576 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Gm23443-201ENSMUST00000082916 128 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col2a1P28481 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col2a1P28481 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.68□□□□□ -1.66
Col2a1P28481 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.67□□□□□ -1.66
Col2a1P28481 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.67□□□□□ -1.66
Col2a1P28481 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col2a1P28481 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.67□□□□□ -1.66
Col2a1P28481 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Gm11262-201ENSMUST00000119326 833 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Gm14605-201ENSMUST00000120599 268 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm15795-201ENSMUST00000160969 553 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Gm17155-201ENSMUST00000165969 473 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Gm27828-201ENSMUST00000184108 119 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 AC132260.2-201ENSMUST00000224482 344 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm25200-201ENSMUST00000083094 130 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col2a1P28481 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col2a1P28481 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col2a1P28481 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col2a1P28481 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.67□□□□□ -1.66
Col2a1P28481 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col2a1P28481 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Col2a1P28481 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col2a1P28481 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Col2a1P28481 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col2a1P28481 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col2a1P28481 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm24014-201ENSMUST00000157728 157 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Gm26320-201ENSMUST00000157742 306 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Gm24998-201ENSMUST00000157908 89 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Col2a1P28481 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm42453-201ENSMUST00000200477 409 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Gm43084-201ENSMUST00000200696 947 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Gm45553-201ENSMUST00000209929 507 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col2a1P28481 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col2a1P28481 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.66□□□□□ -1.66
Col2a1P28481 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col2a1P28481 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.66
Col2a1P28481 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col2a1P28481 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.65□□□□□ -1.66
Col2a1P28481 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
Col2a1P28481 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col2a1P28481 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col2a1P28481 Gm12897-201ENSMUST00000120341 250 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Gm15534-201ENSMUST00000137642 562 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Gm23782-201ENSMUST00000157939 120 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.65□□□□□ -1.66
Col2a1P28481 Gm4248-201ENSMUST00000196905 316 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.65□□□□□ -1.66
Col2a1P28481 Gm18429-201ENSMUST00000198707 421 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms