Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir6989-201ENSMUST00000184812 65 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm27492-201ENSMUST00000185194 187 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm28471-201ENSMUST00000185994 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm28598-201ENSMUST00000186490 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm29268-201ENSMUST00000188669 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm29218-205ENSMUST00000190846 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm28969-211ENSMUST00000190992 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm28978-201ENSMUST00000191120 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm37172-201ENSMUST00000191926 615 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm34176-201ENSMUST00000192621 474 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm42566-201ENSMUST00000197120 643 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm43730-201ENSMUST00000199863 372 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm45034-201ENSMUST00000206831 482 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm7407-201ENSMUST00000208301 568 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm45608-201ENSMUST00000210948 389 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm5185-201ENSMUST00000080271 619 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm23455-201ENSMUST00000083331 100 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sdc1P18828 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
Sdc1P18828 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Sdc1P18828 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm24067-201ENSMUST00000104514 85 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm5060-201ENSMUST00000120072 599 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm25152-201ENSMUST00000157117 114 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Gm24435-201ENSMUST00000157886 110 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.56□□□□□ -1.84
Sdc1P18828 Mir6400-201ENSMUST00000184870 92 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm8458-201ENSMUST00000196658 819 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Gm9332-201ENSMUST00000198431 730 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm5885-202ENSMUST00000203357 528 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm18924-201ENSMUST00000211929 316 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 AC129935.1-201ENSMUST00000226302 873 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Sdc1P18828 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Sdc1P18828 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.56□□□□□ -1.84
Sdc1P18828 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Gm42615-201ENSMUST00000197704 1820 ntBASIC3.56□□□□□ -1.84
Sdc1P18828 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms