Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm3851-201ENSMUST00000168653 318 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.78□□□□□ -1.8
Cdx1P18111 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Cdx1P18111 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm37272-201ENSMUST00000193401 488 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm37243-201ENSMUST00000193407 595 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm43491-201ENSMUST00000197133 784 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm18791-201ENSMUST00000204611 726 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm45032-201ENSMUST00000205375 520 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.78□□□□□ -1.8
Cdx1P18111 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm18387-201ENSMUST00000220333 702 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm19786-201ENSMUST00000222589 580 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 AC125484.1-201ENSMUST00000223218 234 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cdx1P18111 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm23972-201ENSMUST00000083322 165 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Cdx1P18111 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Cdx1P18111 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm26376-201ENSMUST00000104784 110 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm15021-201ENSMUST00000117832 742 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm16128-201ENSMUST00000117855 626 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm15019-201ENSMUST00000120148 434 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm25447-201ENSMUST00000158997 128 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.77□□□□□ -1.81
Cdx1P18111 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Mir5098-201ENSMUST00000175320 82 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm36964-201ENSMUST00000191876 198 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm43919-201ENSMUST00000204303 364 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Cdx1P18111 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm23455-201ENSMUST00000083331 100 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm24763-201ENSMUST00000083688 190 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.77□□□□□ -1.81
Cdx1P18111 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.77□□□□□ -1.81
Cdx1P18111 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cdx1P18111 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms