Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Scarna13-201ENSMUST00000158164 275 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Gm24734-201ENSMUST00000158860 262 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Mir6400-201ENSMUST00000184870 92 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.71□□□□□ -1.66
Lire1P11260 Gm45215-201ENSMUST00000206407 395 ntBASIC4.71□□□□□ -1.66
Lire1P11260 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Gm7639-201ENSMUST00000212608 484 ntBASIC4.71□□□□□ -1.66
Lire1P11260 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.71□□□□□ -1.66
Lire1P11260 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.71□□□□□ -1.66
Lire1P11260 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.71□□□□□ -1.66
Lire1P11260 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Lire1P11260 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Lire1P11260 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Lire1P11260 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.71□□□□□ -1.66
Lire1P11260 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Lire1P11260 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 Gm25647-201ENSMUST00000101832 78 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm25823-201ENSMUST00000101995 78 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Lire1P11260 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm15161-201ENSMUST00000117340 387 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm3835-201ENSMUST00000120752 403 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm11759-201ENSMUST00000121742 464 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm15171-201ENSMUST00000122191 334 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.7□□□□□ -1.66
Lire1P11260 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 Gm26000-201ENSMUST00000157991 107 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm26028-201ENSMUST00000158660 294 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm8256-201ENSMUST00000169178 453 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm24220-201ENSMUST00000177753 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm25988-201ENSMUST00000177759 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm23471-201ENSMUST00000177886 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm26488-201ENSMUST00000178225 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm23449-201ENSMUST00000179208 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm25221-201ENSMUST00000180051 79 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Mir7031-201ENSMUST00000183860 65 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm29492-201ENSMUST00000187124 457 ntBASIC4.7□□□□□ -1.66
Lire1P11260 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm38332-201ENSMUST00000194189 147 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm9238-201ENSMUST00000196181 329 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm42542-201ENSMUST00000197978 268 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Lire1P11260 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.7□□□□□ -1.66
Lire1P11260 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Gm23975-201ENSMUST00000082685 106 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Lire1P11260 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Lire1P11260 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC4.7□□□□□ -1.66
Lire1P11260 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.69□□□□□ -1.66
Lire1P11260 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.69□□□□□ -1.66
Lire1P11260 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.69□□□□□ -1.66
Lire1P11260 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.69□□□□□ -1.66
Lire1P11260 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Lire1P11260 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Lire1P11260 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Lire1P11260 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Lire1P11260 Gm23879-201ENSMUST00000116874 126 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Gm15361-201ENSMUST00000119320 444 ntBASIC4.69□□□□□ -1.66
Lire1P11260 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms