Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.83□□□□□ -1.64
Col1a1P11087 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col1a1P11087 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col1a1P11087 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col1a1P11087 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col1a1P11087 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col1a1P11087 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col1a1P11087 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col1a1P11087 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Gm22497-201ENSMUST00000104499 131 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Gm22514-201ENSMUST00000122547 308 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.82□□□□□ -1.64
Col1a1P11087 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Gm7119-201ENSMUST00000221345 695 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col1a1P11087 Mir370-201ENSMUST00000083499 79 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col1a1P11087 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.82□□□□□ -1.64
Col1a1P11087 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col1a1P11087 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col1a1P11087 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col1a1P11087 Gm9836-201ENSMUST00000117132 216 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm14621-201ENSMUST00000117709 689 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm23391-201ENSMUST00000157579 104 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm22383-201ENSMUST00000158188 327 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm38098-201ENSMUST00000194115 241 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm43586-201ENSMUST00000195948 310 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm20239-201ENSMUST00000196610 982 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm44611-201ENSMUST00000207507 355 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm8745-201ENSMUST00000207846 782 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm8231-201ENSMUST00000221617 783 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col1a1P11087 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.81□□□□□ -1.64
Col1a1P11087 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm25200-201ENSMUST00000083094 130 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col1a1P11087 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col1a1P11087 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col1a1P11087 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm25765-201ENSMUST00000104100 132 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm15018-201ENSMUST00000117090 633 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm13478-201ENSMUST00000118312 413 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm11645-201ENSMUST00000121589 649 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm22320-201ENSMUST00000157149 312 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm25977-201ENSMUST00000158697 85 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm28314-201ENSMUST00000191276 345 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col1a1P11087 Gm8035-201ENSMUST00000204625 687 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Gm8132-201ENSMUST00000204938 640 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col1a1P11087 Mir202-201ENSMUST00000083568 72 ntBASIC4.81□□□□□ -1.64
Col1a1P11087 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col1a1P11087 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.8□□□□□ -1.64
Col1a1P11087 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col1a1P11087 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col1a1P11087 Gm23175-201ENSMUST00000104371 132 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.8□□□□□ -1.64
Col1a1P11087 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Gm23084-201ENSMUST00000157850 114 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Gm22889-201ENSMUST00000158639 58 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Gm8748-201ENSMUST00000211125 587 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Gm3829-201ENSMUST00000222362 619 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.8□□□□□ -1.64
Col1a1P11087 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col1a1P11087 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms