Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mir6541-201ENSMUST00000183649 110 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Trbv8-201ENSMUST00000194020 285 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm2053-201ENSMUST00000195671 631 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm9317-201ENSMUST00000197055 862 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm42886-201ENSMUST00000199214 466 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm31166-201ENSMUST00000209326 288 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr197-201ENSMUST00000080031 926 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.12□□□□□ -1.59
Pcdh1F7BJK1 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm24434-201ENSMUST00000104081 132 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Snora35-201ENSMUST00000104579 128 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm13627-201ENSMUST00000119700 706 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm14831-201ENSMUST00000120253 409 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm11321-201ENSMUST00000121257 902 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm14784-201ENSMUST00000121604 663 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm14970-201ENSMUST00000122289 355 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm25970-201ENSMUST00000157165 86 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm15970-201ENSMUST00000160623 834 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm23872-201ENSMUST00000175432 77 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm20773-201ENSMUST00000178940 681 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Mir6238-201ENSMUST00000184140 129 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Mir6989-201ENSMUST00000184812 65 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm37189-201ENSMUST00000192131 298 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm7166-201ENSMUST00000199715 303 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm8041-201ENSMUST00000199755 616 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm43233-201ENSMUST00000200491 616 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm19921-201ENSMUST00000210505 703 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm45724-201ENSMUST00000213031 420 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms