Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm11970-201ENSMUST00000116105 320 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm28064-201ENSMUST00000185639 858 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm19739-201ENSMUST00000195941 153 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm36259-201ENSMUST00000197340 392 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm43424-201ENSMUST00000200484 253 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm7948-201ENSMUST00000212607 844 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm22249-201ENSMUST00000082485 136 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm11718-201ENSMUST00000119942 537 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm7308-201ENSMUST00000121087 447 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm28113-201ENSMUST00000188280 229 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 AC154257.1-201ENSMUST00000224811 1525 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm38137-201ENSMUST00000193735 1401 ntBASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a3E9PWQ3 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm26020-201ENSMUST00000122729 183 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm8569-201ENSMUST00000117630 647 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm11260-201ENSMUST00000121163 942 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm14603-201ENSMUST00000121275 448 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm32222-201ENSMUST00000203296 298 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm25821-201ENSMUST00000093657 133 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col6a3E9PWQ3 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm37006-201ENSMUST00000195253 2674 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm14575-201ENSMUST00000117210 560 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm14975-201ENSMUST00000118741 664 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm15026-201ENSMUST00000119219 458 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm11742-201ENSMUST00000119903 233 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm22398-201ENSMUST00000174941 125 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm25731-201ENSMUST00000175167 125 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm37881-201ENSMUST00000193001 421 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm19908-201ENSMUST00000204684 391 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a3E9PWQ3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Gm43330-201ENSMUST00000199706 2153 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC4□□□□□ -1.77
Col6a3E9PWQ3 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a3E9PWQ3 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms