Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm14714-201ENSMUST00000119743 439 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm25665-201ENSMUST00000157695 110 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Trbv10-201ENSMUST00000168322 289 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm27805-201ENSMUST00000184513 79 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm28974-201ENSMUST00000187893 231 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm19908-201ENSMUST00000204684 391 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm44817-201ENSMUST00000205416 453 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm44757-201ENSMUST00000206373 157 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm45574-201ENSMUST00000210921 331 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Mir504-201ENSMUST00000093602 79 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.12□□□□□ -1.75
Cldn9Q9Z0S7 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm23948-201ENSMUST00000104030 132 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm14388-201ENSMUST00000118119 477 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm11633-201ENSMUST00000118176 444 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm14933-201ENSMUST00000118840 481 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm10444-201ENSMUST00000126708 148 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm24690-201ENSMUST00000157759 97 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm22156-201ENSMUST00000158409 141 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm4842-201ENSMUST00000183237 835 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Mir7031-201ENSMUST00000183860 65 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Mir6410-201ENSMUST00000184204 104 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm29552-201ENSMUST00000190548 660 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm9238-201ENSMUST00000196181 329 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm4714-201ENSMUST00000203395 279 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm45081-201ENSMUST00000206281 572 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm44946-201ENSMUST00000208425 572 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm7093-201ENSMUST00000223004 581 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Mecom-201ENSMUST00000061088 348 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.11□□□□□ -1.75
Cldn9Q9Z0S7 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cldn9Q9Z0S7 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cldn9Q9Z0S7 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.1□□□□□ -1.75
Cldn9Q9Z0S7 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Cldn9Q9Z0S7 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cldn9Q9Z0S7 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms