Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Mir676-201ENSMUST00000102443 89 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm22899-201ENSMUST00000104540 131 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm15382-201ENSMUST00000118011 537 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm15166-201ENSMUST00000120790 385 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm7840-201ENSMUST00000122086 533 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm26098-201ENSMUST00000157247 288 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm26312-201ENSMUST00000157769 165 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm25655-201ENSMUST00000158465 290 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm22940-201ENSMUST00000158560 155 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm3030-201ENSMUST00000163410 516 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm3339-201ENSMUST00000163462 475 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm17060-201ENSMUST00000172394 824 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm5558-201ENSMUST00000178933 495 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm29668-201ENSMUST00000187802 315 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm32536-201ENSMUST00000205209 445 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm45367-201ENSMUST00000210171 347 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm22155-201ENSMUST00000083836 162 ntBASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Vps28Q9D1C8 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm25313-201ENSMUST00000101817 116 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm17164-201ENSMUST00000169013 506 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm23287-201ENSMUST00000179427 116 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm23143-201ENSMUST00000180137 116 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm25120-201ENSMUST00000180148 79 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Mir6986-201ENSMUST00000184483 58 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm28503-201ENSMUST00000185966 147 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm29484-201ENSMUST00000186067 324 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm18382-201ENSMUST00000194394 582 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm34224-201ENSMUST00000204606 364 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm45228-201ENSMUST00000206585 352 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm18877-201ENSMUST00000207706 539 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm44554-201ENSMUST00000208738 147 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm17766-201ENSMUST00000209223 442 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm34005-201ENSMUST00000215834 282 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Gm24871-201ENSMUST00000083099 116 ntBASIC4.86□□□□□ -1.63
Vps28Q9D1C8 Mir325-201ENSMUST00000083491 98 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms