Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm23692-201ENSMUST00000101881 160 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm23942-201ENSMUST00000101956 107 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm26384-201ENSMUST00000102183 110 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm14197-201ENSMUST00000117480 1049 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm13451-201ENSMUST00000117649 592 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm14220-201ENSMUST00000118114 449 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm13787-201ENSMUST00000120422 168 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm12732-201ENSMUST00000121688 180 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm15877-201ENSMUST00000121897 964 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm23224-201ENSMUST00000158122 271 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm8221-201ENSMUST00000178052 564 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm27409-201ENSMUST00000184727 80 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm29335-201ENSMUST00000188361 459 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm6057-201ENSMUST00000195927 314 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm45226-201ENSMUST00000206602 288 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm4587-201ENSMUST00000209135 637 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm45874-201ENSMUST00000212423 346 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm23628-201ENSMUST00000082464 173 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm23456-201ENSMUST00000083335 137 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm26111-201ENSMUST00000083969 106 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm26107-201ENSMUST00000083972 107 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Mir466n-201ENSMUST00000104798 94 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm14365-201ENSMUST00000117535 587 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm12492-201ENSMUST00000117665 564 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm15660-201ENSMUST00000118997 478 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm14679-201ENSMUST00000121536 722 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm24628-201ENSMUST00000122761 289 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm23760-201ENSMUST00000158350 116 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm23855-201ENSMUST00000158377 135 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm25489-201ENSMUST00000158727 141 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm22252-201ENSMUST00000179316 79 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm27887-201ENSMUST00000184367 102 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm38019-201ENSMUST00000195133 380 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm6520-201ENSMUST00000200636 410 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm42458-201ENSMUST00000201914 369 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.66□□□□□ -1.5
RpainQ9CWY9 Gm45228-201ENSMUST00000206585 352 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.66□□□□□ -1.5
RpainQ9CWY9 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms