Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm15974-201ENSMUST00000159103 531 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm6472-201ENSMUST00000178147 651 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Mir6411-201ENSMUST00000183556 108 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Mir7211-201ENSMUST00000184071 63 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm29105-201ENSMUST00000187256 450 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm42579-201ENSMUST00000200512 734 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm31861-201ENSMUST00000204563 672 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trim8Q99PJ2 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm23424-201ENSMUST00000103889 110 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm5943-201ENSMUST00000119458 459 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm13000-201ENSMUST00000120937 496 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm12368-201ENSMUST00000122251 434 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm22210-201ENSMUST00000158101 144 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Mir5125-201ENSMUST00000175240 79 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm22932-201ENSMUST00000175510 72 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm27030-201ENSMUST00000182551 464 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm28660-201ENSMUST00000186496 253 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm29524-201ENSMUST00000190819 699 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm17954-201ENSMUST00000195893 607 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm9632-201ENSMUST00000195934 643 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm44673-201ENSMUST00000205692 996 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm18410-201ENSMUST00000207199 577 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm45658-201ENSMUST00000209197 580 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Gm4510-201ENSMUST00000218265 427 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim8Q99PJ2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.3□□□□□ -1.56
Trim8Q99PJ2 mt-Tr-201ENSMUST00000082412 68 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms