Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm44184-201ENSMUST00000204290 132 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm18007-201ENSMUST00000205019 844 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm44654-201ENSMUST00000208052 329 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm6049-201ENSMUST00000222369 458 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm7042-201ENSMUST00000223027 384 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 CT025602.1-201ENSMUST00000227281 382 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm22293-201ENSMUST00000083314 109 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm23750-201ENSMUST00000104222 132 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm15951-201ENSMUST00000118377 400 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm12717-201ENSMUST00000118427 983 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm12808-201ENSMUST00000120597 404 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm13007-201ENSMUST00000121866 365 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm23538-201ENSMUST00000157535 101 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm25603-201ENSMUST00000158361 105 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm18728-201ENSMUST00000186155 753 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm29650-201ENSMUST00000188485 742 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm28061-201ENSMUST00000189085 807 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm38046-201ENSMUST00000192733 550 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm43712-201ENSMUST00000198020 291 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Mir6994-201ENSMUST00000198985 73 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm43214-201ENSMUST00000199242 352 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm4501-201ENSMUST00000207330 551 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm4558-201ENSMUST00000207886 521 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm4528-201ENSMUST00000207905 551 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm10064-201ENSMUST00000071235 399 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm37064-201ENSMUST00000193851 2231 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.27□□□□□ -1.41
Clp1Q99LI9 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clp1Q99LI9 Gm37903-201ENSMUST00000192122 2381 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm19136-201ENSMUST00000190706 2067 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm15399-201ENSMUST00000118055 724 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm12095-201ENSMUST00000121962 816 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms