Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm27190-201ENSMUST00000184890 542 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm8599-201ENSMUST00000193033 457 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Trbv11-201ENSMUST00000194354 260 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm2053-201ENSMUST00000195671 631 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm44845-201ENSMUST00000208773 335 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Olfr881-201ENSMUST00000074611 948 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Snord14e-201ENSMUST00000082857 90 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm7269-201ENSMUST00000210819 1373 ntBASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nup35Q8R4R6 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm14816-201ENSMUST00000117174 294 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm4342-201ENSMUST00000118982 367 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm15206-201ENSMUST00000119143 454 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm5379-201ENSMUST00000120973 826 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm11894-201ENSMUST00000121579 328 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm15905-201ENSMUST00000137042 298 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm16327-201ENSMUST00000137146 228 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm22314-201ENSMUST00000158007 281 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm25660-201ENSMUST00000158470 104 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm25264-201ENSMUST00000158519 117 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm23179-201ENSMUST00000158693 304 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm6245-201ENSMUST00000164699 768 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm17159-201ENSMUST00000169043 482 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm8604-201ENSMUST00000183150 965 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Mir7008-201ENSMUST00000184398 63 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm27690-201ENSMUST00000184596 126 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm5372-201ENSMUST00000187540 409 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm8480-201ENSMUST00000190350 698 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm8861-201ENSMUST00000196346 832 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Mir7682-201ENSMUST00000198467 58 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm17887-201ENSMUST00000200194 547 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm2691-201ENSMUST00000203205 901 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm19269-201ENSMUST00000211401 804 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm45735-201ENSMUST00000212779 319 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Mir17-201ENSMUST00000083574 84 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Mir337-201ENSMUST00000083592 97 ntBASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nup35Q8R4R6 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.34□□□□□ -1.88
Nup35Q8R4R6 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Nup35Q8R4R6 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Nup35Q8R4R6 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 AC112142.1-203ENSMUST00000228670 2472 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm12486-201ENSMUST00000120887 541 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm12103-201ENSMUST00000121892 362 ntBASIC3.33□□□□□ -1.88
Nup35Q8R4R6 Gm14916-201ENSMUST00000121904 204 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms