Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Nup88Q8CEC0 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm22473-201ENSMUST00000104114 132 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm15752-201ENSMUST00000117427 394 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm12311-201ENSMUST00000118803 374 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Samd15-201ENSMUST00000169669 1194 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm3084-201ENSMUST00000169967 598 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm27414-201ENSMUST00000185033 381 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm17951-201ENSMUST00000198536 496 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm45498-201ENSMUST00000210346 283 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Nup88Q8CEC0 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm23709-201ENSMUST00000104364 130 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm11971-201ENSMUST00000117715 288 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm9432-201ENSMUST00000117810 759 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm25427-201ENSMUST00000157605 103 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm22968-201ENSMUST00000157955 118 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm19898-201ENSMUST00000177490 251 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm27834-201ENSMUST00000183427 125 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm28830-201ENSMUST00000188192 213 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm2691-201ENSMUST00000203205 901 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm44665-201ENSMUST00000205381 251 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm18258-201ENSMUST00000210413 542 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm18442-201ENSMUST00000220925 639 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Mir346-201ENSMUST00000083547 98 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.25□□□□□ -1.57
Nup88Q8CEC0 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Nup88Q8CEC0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm11914-201ENSMUST00000117094 507 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm14933-201ENSMUST00000118840 481 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm11350-201ENSMUST00000121436 870 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Snora81-201ENSMUST00000157310 178 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm24689-201ENSMUST00000157760 104 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.24□□□□□ -1.57
Nup88Q8CEC0 Gm27883-201ENSMUST00000183941 102 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms