Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm8158-201ENSMUST00000219220 465 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm8112-201ENSMUST00000219637 465 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Vps53Q8CCB4 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm12039-201ENSMUST00000118219 180 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm12820-201ENSMUST00000119233 342 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm11742-201ENSMUST00000119903 233 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm12466-201ENSMUST00000121199 620 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm13162-201ENSMUST00000121481 454 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm17377-201ENSMUST00000165184 207 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm20689-201ENSMUST00000176033 279 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm28639-201ENSMUST00000191519 481 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm43848-201ENSMUST00000198060 1247 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm43418-201ENSMUST00000201334 428 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm7117-201ENSMUST00000071515 387 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Vps53Q8CCB4 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm15905-201ENSMUST00000137042 298 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm24944-201ENSMUST00000158330 128 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm27155-201ENSMUST00000183716 898 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm43245-201ENSMUST00000197603 468 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm43309-201ENSMUST00000200837 458 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm6906-201ENSMUST00000218014 569 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm30738-201ENSMUST00000221346 502 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm17915-201ENSMUST00000222077 548 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm26072-201ENSMUST00000083135 107 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm25818-201ENSMUST00000083282 164 ntBASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Vps53Q8CCB4 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms