Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Scarna17-201ENSMUST00000158064 79 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm23117-201ENSMUST00000158482 108 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm22665-201ENSMUST00000158720 275 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm24576-201ENSMUST00000175508 248 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm43814-201ENSMUST00000197851 413 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim35Q8C006 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm7422-201ENSMUST00000220115 640 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Trim35Q8C006 AC129085.1-201ENSMUST00000225263 165 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
Trim35Q8C006 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim35Q8C006 Snora19-201ENSMUST00000082962 132 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Gm23658-201ENSMUST00000083233 132 ntBASIC7.65□□□□□ -1.18
Trim35Q8C006 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.19
Trim35Q8C006 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Trim35Q8C006 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim35Q8C006 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim35Q8C006 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim35Q8C006 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim35Q8C006 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim35Q8C006 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm37363-201ENSMUST00000192336 2233 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Trim35Q8C006 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Mir669b-201ENSMUST00000102172 97 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm23652-201ENSMUST00000116752 107 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm12692-201ENSMUST00000121092 546 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm22670-201ENSMUST00000158724 143 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm17166-201ENSMUST00000172006 431 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm29362-201ENSMUST00000187898 133 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm2979-201ENSMUST00000193442 463 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm22149-202ENSMUST00000196259 137 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm42965-201ENSMUST00000201254 250 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm33601-201ENSMUST00000210001 961 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm9289-201ENSMUST00000221269 606 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 LOC667541-201ENSMUST00000223408 278 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.64□□□□□ -1.19
Trim35Q8C006 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim35Q8C006 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim35Q8C006 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim35Q8C006 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.63□□□□□ -1.19
Trim35Q8C006 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.63□□□□□ -1.19
Trim35Q8C006 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim35Q8C006 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms