Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm24897-201ENSMUST00000179033 107 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm27004-201ENSMUST00000183300 727 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm27694-201ENSMUST00000184740 86 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm32175-201ENSMUST00000193641 346 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm44041-201ENSMUST00000203678 396 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm19252-201ENSMUST00000204705 305 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm4510-201ENSMUST00000218265 427 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Gm23502-201ENSMUST00000083902 145 ntBASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Pcdh19Q80TF3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Pcdh19Q80TF3 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm14594-201ENSMUST00000118052 537 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm15333-201ENSMUST00000118825 364 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm14590-201ENSMUST00000118934 537 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm12935-201ENSMUST00000119352 246 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm11925-201ENSMUST00000121375 535 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm12095-201ENSMUST00000121962 816 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm25184-201ENSMUST00000157753 163 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm22210-201ENSMUST00000158101 144 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm23225-201ENSMUST00000158121 114 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm16557-201ENSMUST00000159182 191 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm16101-201ENSMUST00000160695 430 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm20673-201ENSMUST00000177167 430 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm14596-201ENSMUST00000180268 537 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm14595-201ENSMUST00000180335 537 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm27960-201ENSMUST00000183445 184 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm44923-201ENSMUST00000206673 85 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm20304-201ENSMUST00000218168 444 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm25515-201ENSMUST00000083858 157 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Pcdh19Q80TF3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Pcdh19Q80TF3 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms