Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Chd4Q6PDQ2 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm25420-201ENSMUST00000104216 127 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm13771-201ENSMUST00000117988 238 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm43930-201ENSMUST00000203868 845 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm44624-201ENSMUST00000208700 2278 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm27762-201ENSMUST00000183417 109 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Gm44871-201ENSMUST00000207821 497 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 AC154419.1-201ENSMUST00000227627 272 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Chd4Q6PDQ2 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm37001-201ENSMUST00000193377 190 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm43424-201ENSMUST00000200484 253 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm45539-201ENSMUST00000210313 428 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm7786-201ENSMUST00000210494 436 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Chd4Q6PDQ2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm11212-201ENSMUST00000118337 618 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm15026-201ENSMUST00000119219 458 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm6079-201ENSMUST00000121356 404 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm10357-201ENSMUST00000159886 264 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm22398-201ENSMUST00000174941 125 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm25731-201ENSMUST00000175167 125 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm20561-201ENSMUST00000188131 292 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm37319-201ENSMUST00000193500 636 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 CT009764.1-201ENSMUST00000222260 483 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Snora7a-201ENSMUST00000082629 140 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Chd4Q6PDQ2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms