Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim28Q62318 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 AL772265.1-201ENSMUST00000214379 305 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 CT572983.1-201ENSMUST00000226895 514 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 AC154627.3-201ENSMUST00000228441 334 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim28Q62318 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim28Q62318 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm38125-201ENSMUST00000194136 3438 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Trim28Q62318 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Trim28Q62318 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim28Q62318 Gm3675-201ENSMUST00000175904 1653 ntBASIC6.17□□□□□ -1.42
Trim28Q62318 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim28Q62318 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Trim28Q62318 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm12994-201ENSMUST00000119601 447 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm4910-201ENSMUST00000119605 366 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm11742-201ENSMUST00000119903 233 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm16458-201ENSMUST00000121428 502 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm16250-201ENSMUST00000148974 256 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm26487-201ENSMUST00000158022 94 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm3102-201ENSMUST00000164236 489 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm17064-201ENSMUST00000167690 452 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.16□□□□□ -1.42
Trim28Q62318 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm38261-201ENSMUST00000192608 316 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm38213-201ENSMUST00000193203 173 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm37659-201ENSMUST00000194574 111 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm44474-201ENSMUST00000196525 127 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Gm45857-201ENSMUST00000212207 356 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim28Q62318 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trim28Q62318 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm23970-201ENSMUST00000083319 107 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Trim28Q62318 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Trim28Q62318 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Trim28Q62318 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim28Q62318 Gm45697-201ENSMUST00000212893 2876 ntBASIC6.16□□□□□ -1.42
Trim28Q62318 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trim28Q62318 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim28Q62318 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm23193-201ENSMUST00000102427 82 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm22195-201ENSMUST00000116861 108 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm11854-201ENSMUST00000117839 446 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm14303-201ENSMUST00000121320 171 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm12893-201ENSMUST00000121732 275 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Mir1898-201ENSMUST00000122643 83 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm25714-201ENSMUST00000158626 296 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm22326-201ENSMUST00000158897 351 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm17038-201ENSMUST00000166586 494 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm27883-201ENSMUST00000183941 102 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm18181-201ENSMUST00000190670 736 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm37908-201ENSMUST00000195828 470 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim28Q62318 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trim28Q62318 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 AL935138.1-201ENSMUST00000215309 196 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Gm46369-201ENSMUST00000221577 401 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 AC140209.1-204ENSMUST00000226736 739 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 CT030662.1-201ENSMUST00000227380 232 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms