Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.56□□□□□ -1.68
Upf3bQ3ULL6 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Mir193b-201ENSMUST00000103784 79 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm25726-201ENSMUST00000104529 129 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm25271-201ENSMUST00000157273 290 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm17109-201ENSMUST00000163985 358 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Rab26os-201ENSMUST00000176215 477 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm8823-201ENSMUST00000193158 433 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm44946-201ENSMUST00000208425 572 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.55□□□□□ -1.68
Upf3bQ3ULL6 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm24855-201ENSMUST00000104848 97 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm14365-201ENSMUST00000117535 587 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm14725-201ENSMUST00000120324 828 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm23789-201ENSMUST00000122536 301 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm22156-201ENSMUST00000158409 141 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm16558-201ENSMUST00000163015 532 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Mir7031-201ENSMUST00000183860 65 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm27899-201ENSMUST00000184715 64 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm21139-201ENSMUST00000186594 877 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm38166-201ENSMUST00000191660 471 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm4410-201ENSMUST00000199349 686 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.54□□□□□ -1.68
Upf3bQ3ULL6 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm12849-201ENSMUST00000120013 739 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm5379-201ENSMUST00000120973 826 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm23171-201ENSMUST00000157159 264 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm25913-201ENSMUST00000157617 135 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm23023-201ENSMUST00000158767 109 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms