Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm11677-201ENSMUST00000121349 977 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm6175-201ENSMUST00000121351 400 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm20545-201ENSMUST00000174739 210 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm28700-201ENSMUST00000187614 579 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm40692-201ENSMUST00000220411 491 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm18113-201ENSMUST00000220630 303 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm18247-201ENSMUST00000222937 601 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.65□□□□□ -1.5
Ebf1Q07802 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ebf1Q07802 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ebf1Q07802 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ebf1Q07802 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ebf1Q07802 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Ebf1Q07802 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ebf1Q07802 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ebf1Q07802 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ebf1Q07802 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Ebf1Q07802 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.65□□□□□ -1.51
Ebf1Q07802 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Ebf1Q07802 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Ebf1Q07802 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Zfp389-201ENSMUST00000118425 675 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm15428-201ENSMUST00000121352 333 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm26312-201ENSMUST00000157769 165 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Mir1945-201ENSMUST00000157919 78 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm24225-201ENSMUST00000158825 98 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm8221-201ENSMUST00000178052 564 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm25019-201ENSMUST00000179732 110 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm9457-201ENSMUST00000180176 372 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm42594-201ENSMUST00000199511 246 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm3148-201ENSMUST00000203594 612 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm44048-201ENSMUST00000204531 361 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm18850-201ENSMUST00000211578 388 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.64□□□□□ -1.51
Ebf1Q07802 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm22810-201ENSMUST00000082741 158 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.64□□□□□ -1.51
Ebf1Q07802 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ebf1Q07802 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ebf1Q07802 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ebf1Q07802 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.63□□□□□ -1.51
Ebf1Q07802 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.63□□□□□ -1.51
Ebf1Q07802 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.63□□□□□ -1.51
Ebf1Q07802 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ebf1Q07802 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ebf1Q07802 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ebf1Q07802 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms