Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm14065-201ENSMUST00000120848 585 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm12412-201ENSMUST00000121867 328 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm24498-201ENSMUST00000158445 102 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm8816-201ENSMUST00000182280 1163 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm29408-201ENSMUST00000187536 216 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm18357-201ENSMUST00000188184 580 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm18303-201ENSMUST00000190055 1176 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 AC138284.2-201ENSMUST00000213982 567 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Olfr936-202ENSMUST00000216912 937 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 AC131747.1-201ENSMUST00000226159 793 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col17a1Q07563 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm24175-201ENSMUST00000158931 129 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm22243-201ENSMUST00000178754 120 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm28661-201ENSMUST00000188231 681 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm29161-201ENSMUST00000188250 699 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm37543-201ENSMUST00000192443 1031 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm37636-201ENSMUST00000193583 359 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm38098-201ENSMUST00000194115 241 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm9722-201ENSMUST00000194568 802 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm43853-201ENSMUST00000197162 301 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm42983-201ENSMUST00000199879 815 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm43895-201ENSMUST00000203219 855 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm24147-201ENSMUST00000082763 144 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Gm37767-201ENSMUST00000193239 1834 ntBASIC7.22□□□□□ -1.25
Col17a1Q07563 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Col17a1Q07563 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Col17a1Q07563 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Col17a1Q07563 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col17a1Q07563 AC121870.1-201ENSMUST00000216279 4879 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Col17a1Q07563 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Col17a1Q07563 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.25
Col17a1Q07563 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC7.21□□□□□ -1.25
Col17a1Q07563 Gm37357-201ENSMUST00000192386 3123 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 AC123858.1-201ENSMUST00000226948 1874 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col17a1Q07563 Gm29112-201ENSMUST00000188962 3487 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC7.21□□□□□ -1.25
Col17a1Q07563 AC164092.3-201ENSMUST00000216970 1323 ntBASIC7.21□□□□□ -1.25
Col17a1Q07563 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm23429-201ENSMUST00000122486 149 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm17164-201ENSMUST00000169013 506 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC7.21□□□□□ -1.26
Col17a1Q07563 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 AC122188.1-201ENSMUST00000217534 312 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 AC118230.1-201ENSMUST00000220196 656 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm23925-201ENSMUST00000082471 132 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm23736-201ENSMUST00000082553 75 ntBASIC7.21□□□□□ -1.26
Col17a1Q07563 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col17a1Q07563 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col17a1Q07563 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col17a1Q07563 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Col17a1Q07563 AC113059.3-201ENSMUST00000217423 2777 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm5155-201ENSMUST00000072381 2841 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm24281-201ENSMUST00000104234 136 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm23760-201ENSMUST00000158350 116 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm25907-201ENSMUST00000158486 125 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm22890-201ENSMUST00000158642 144 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm17046-201ENSMUST00000168078 850 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm9569-201ENSMUST00000187492 787 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm9317-201ENSMUST00000197055 862 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm18861-201ENSMUST00000202509 1186 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col17a1Q07563 Gm45912-201ENSMUST00000210646 543 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 AL929265.1-201ENSMUST00000213427 125 ntBASIC7.2□□□□□ -1.26
Col17a1Q07563 AC154738.2-201ENSMUST00000227403 1110 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms