Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm43092-201ENSMUST00000202986 1854 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm11386-201ENSMUST00000117761 347 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm15126-201ENSMUST00000118631 833 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm14784-201ENSMUST00000121604 663 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm23024-201ENSMUST00000158770 292 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm23028-201ENSMUST00000158773 265 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm17907-201ENSMUST00000173150 710 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm26950-201ENSMUST00000182734 498 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm26993-201ENSMUST00000182766 789 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm27193-201ENSMUST00000184217 586 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Mir7087-201ENSMUST00000184840 70 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm29490-201ENSMUST00000190923 342 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm37501-201ENSMUST00000192830 691 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Mir342-201ENSMUST00000083502 99 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Mir421-201ENSMUST00000083575 76 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.26□□□□□ -1.41
Col6a1Q04857 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col6a1Q04857 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Col6a1Q04857 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm42483-201ENSMUST00000197556 1742 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm14785-201ENSMUST00000120185 539 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm11677-201ENSMUST00000121349 977 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm12267-201ENSMUST00000121609 761 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm23032-201ENSMUST00000157995 107 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm28579-201ENSMUST00000186143 369 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm43078-201ENSMUST00000197222 168 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Mir5121-201ENSMUST00000198528 74 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm45366-201ENSMUST00000209828 384 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.25□□□□□ -1.41
Col6a1Q04857 Gm46994-201ENSMUST00000221523 219 ntBASIC6.25□□□□□ -1.41
Col6a1Q04857 AC211878.2-201ENSMUST00000222486 488 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms