Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LdlrP35951 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Gm6134-201ENSMUST00000117265 171 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm13259-201ENSMUST00000120792 456 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm12041-201ENSMUST00000121606 602 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm13131-201ENSMUST00000122228 321 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm25807-201ENSMUST00000122783 305 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Gm23981-201ENSMUST00000157136 106 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.21□□□□□ -1.58
LdlrP35951 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm38011-201ENSMUST00000193312 279 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm38041-201ENSMUST00000194445 661 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm21006-201ENSMUST00000196930 667 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm43171-201ENSMUST00000199882 291 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.21□□□□□ -1.58
LdlrP35951 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.21□□□□□ -1.58
LdlrP35951 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Gm45673-201ENSMUST00000210293 358 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm17999-201ENSMUST00000211568 542 ntBASIC5.21□□□□□ -1.58
LdlrP35951 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.21□□□□□ -1.58
LdlrP35951 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.21□□□□□ -1.58
LdlrP35951 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.21□□□□□ -1.58
LdlrP35951 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.21□□□□□ -1.58
LdlrP35951 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LdlrP35951 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LdlrP35951 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LdlrP35951 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.21□□□□□ -1.58
LdlrP35951 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LdlrP35951 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.21□□□□□ -1.58
LdlrP35951 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Gm22591-201ENSMUST00000104243 106 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm13681-201ENSMUST00000117925 210 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm14293-201ENSMUST00000118528 577 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm13788-201ENSMUST00000120767 601 ntBASIC5.2□□□□□ -1.58
LdlrP35951 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm23211-201ENSMUST00000122717 308 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.2□□□□□ -1.58
LdlrP35951 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm7316-201ENSMUST00000165395 445 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm3216-201ENSMUST00000166927 486 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm6395-201ENSMUST00000167639 691 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm3141-201ENSMUST00000168726 499 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm27919-201ENSMUST00000185163 107 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm28343-201ENSMUST00000185386 112 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm3454-201ENSMUST00000185571 412 ntBASIC5.2□□□□□ -1.58
LdlrP35951 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm38221-201ENSMUST00000195146 365 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm36986-201ENSMUST00000195320 353 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Mir7116-201ENSMUST00000195956 70 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm33626-201ENSMUST00000206790 828 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.2□□□□□ -1.58
LdlrP35951 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm18557-201ENSMUST00000218710 433 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm18904-201ENSMUST00000218756 329 ntBASIC5.2□□□□□ -1.58
LdlrP35951 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm11360-201ENSMUST00000221898 262 ntBASIC5.2□□□□□ -1.58
LdlrP35951 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LdlrP35951 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LdlrP35951 Gm23975-201ENSMUST00000082685 106 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Rny3-201ENSMUST00000083011 102 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Gm23459-201ENSMUST00000083259 131 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Mir27a-201ENSMUST00000083510 87 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LdlrP35951 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LdlrP35951 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.2□□□□□ -1.58
LdlrP35951 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms