Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Usp4P35123 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp4P35123 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.64□□□□□ -1.51
Usp4P35123 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp4P35123 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Usp4P35123 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.64□□□□□ -1.51
Usp4P35123 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp4P35123 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.64□□□□□ -1.51
Usp4P35123 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.64□□□□□ -1.51
Usp4P35123 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usp4P35123 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp4P35123 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.63□□□□□ -1.51
Usp4P35123 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm42606-201ENSMUST00000114209 239 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm8202-201ENSMUST00000117682 310 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm11971-201ENSMUST00000117715 288 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm13887-201ENSMUST00000119009 344 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm26349-201ENSMUST00000157530 130 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp4P35123 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm27636-201ENSMUST00000184528 122 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm37501-201ENSMUST00000192830 691 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm37030-201ENSMUST00000194254 295 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm43054-201ENSMUST00000199495 884 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm8774-201ENSMUST00000203621 692 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.63□□□□□ -1.51
Usp4P35123 Gm44254-201ENSMUST00000204184 322 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm44307-201ENSMUST00000204466 764 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm45596-201ENSMUST00000209279 434 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Gm6362-201ENSMUST00000217686 836 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.63□□□□□ -1.51
Usp4P35123 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.63□□□□□ -1.51
Usp4P35123 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp4P35123 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Usp4P35123 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Mir337-201ENSMUST00000083592 97 ntBASIC5.63□□□□□ -1.51
Usp4P35123 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp4P35123 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp4P35123 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp4P35123 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.63□□□□□ -1.51
Usp4P35123 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Usp4P35123 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp4P35123 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Usp4P35123 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp4P35123 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Usp4P35123 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Usp4P35123 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Gm26384-201ENSMUST00000102183 110 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp4P35123 Gm24230-201ENSMUST00000104313 129 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Gm25315-201ENSMUST00000116823 121 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Gm13579-201ENSMUST00000118519 517 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Gm14106-201ENSMUST00000119382 438 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Gm13533-201ENSMUST00000121104 177 ntBASIC5.62□□□□□ -1.51
Usp4P35123 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Gm24438-201ENSMUST00000157893 115 ntBASIC5.62□□□□□ -1.51
Usp4P35123 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.62□□□□□ -1.51
Usp4P35123 Mir3080-201ENSMUST00000175010 79 ntBASIC5.62□□□□□ -1.51
Usp4P35123 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp4P35123 Mir7687-201ENSMUST00000184722 59 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms