Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23585-201ENSMUST00000157656 102 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm25445-201ENSMUST00000158996 299 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC3.59□□□□□ -1.83
Sdc1P18828 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm43774-201ENSMUST00000196327 878 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm9245-201ENSMUST00000200528 983 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm8774-201ENSMUST00000203621 692 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.59□□□□□ -1.83
Sdc1P18828 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Sdc1P18828 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm9512-201ENSMUST00000223112 497 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sdc1P18828 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.59□□□□□ -1.83
Sdc1P18828 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Sdc1P18828 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Sdc1P18828 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Sdc1P18828 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sdc1P18828 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm22374-201ENSMUST00000104583 132 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm12074-201ENSMUST00000120189 219 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Mup-ps19-201ENSMUST00000120390 519 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm11404-201ENSMUST00000120872 494 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm14623-201ENSMUST00000121398 603 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sdc1P18828 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm24774-201ENSMUST00000157384 134 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm25459-201ENSMUST00000157953 114 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm26028-201ENSMUST00000158660 294 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm8224-201ENSMUST00000166178 497 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm20526-201ENSMUST00000173416 158 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm29284-201ENSMUST00000188363 255 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm37187-201ENSMUST00000193425 341 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm43856-201ENSMUST00000197004 369 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm45189-201ENSMUST00000208567 363 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Gm45857-201ENSMUST00000212207 356 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.58□□□□□ -1.84
Sdc1P18828 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 AC114573.1-201ENSMUST00000224120 1210 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 AC152169.2-201ENSMUST00000224558 613 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm4963-201ENSMUST00000072718 378 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdc1P18828 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Sdc1P18828 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm5155-201ENSMUST00000072381 2841 ntBASIC3.58□□□□□ -1.84
Sdc1P18828 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sdc1P18828 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Sdc1P18828 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC3.57□□□□□ -1.84
Sdc1P18828 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm15001-201ENSMUST00000117657 795 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm13815-201ENSMUST00000119963 412 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Sdc1P18828 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm13932-201ENSMUST00000120873 610 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm12340-201ENSMUST00000121617 462 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm14126-201ENSMUST00000122345 395 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.57□□□□□ -1.84
Sdc1P18828 Gm3362-201ENSMUST00000148102 466 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm23957-201ENSMUST00000157209 90 ntBASIC3.57□□□□□ -1.84
Sdc1P18828 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Sdc1P18828 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms