Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm18747-201ENSMUST00000198129 648 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm17775-201ENSMUST00000198542 258 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm42850-201ENSMUST00000202094 201 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm19726-201ENSMUST00000205008 240 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Supt4b-201ENSMUST00000214434 351 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx1P18111 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Gm17915-201ENSMUST00000222077 548 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm23508-201ENSMUST00000083079 72 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.8□□□□□ -1.8
Cdx1P18111 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cdx1P18111 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm25418-201ENSMUST00000104214 129 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm14771-201ENSMUST00000118249 203 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm11346-201ENSMUST00000118346 704 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm15141-201ENSMUST00000121860 729 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 n-R5s174-201ENSMUST00000122638 121 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm16254-201ENSMUST00000131528 730 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm23993-201ENSMUST00000157478 144 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm8807-201ENSMUST00000179328 492 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Mir7031-201ENSMUST00000183860 65 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm29031-201ENSMUST00000185316 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm29000-201ENSMUST00000185444 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm28204-201ENSMUST00000185934 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm28290-201ENSMUST00000186505 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm28161-201ENSMUST00000186669 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm28749-209ENSMUST00000189599 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm29038-201ENSMUST00000191543 678 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm33163-201ENSMUST00000194504 614 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm37676-201ENSMUST00000195496 507 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm43028-201ENSMUST00000202561 481 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm44779-201ENSMUST00000206937 708 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm29884-201ENSMUST00000218403 453 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 AC123064.1-201ENSMUST00000218950 406 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Gm4263-202ENSMUST00000221392 667 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Mir342-201ENSMUST00000083502 99 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.79□□□□□ -1.8
Cdx1P18111 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Cdx1P18111 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC3.79□□□□□ -1.8
Cdx1P18111 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cdx1P18111 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cdx1P18111 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm24117-201ENSMUST00000103973 133 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cdx1P18111 Gm12294-201ENSMUST00000119723 490 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm25865-201ENSMUST00000158247 104 ntBASIC3.78□□□□□ -1.8
Cdx1P18111 Gm7316-201ENSMUST00000165395 445 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms