Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Gm15916-201ENSMUST00000118355 736 ntBASIC2.56□□□□□ -2
P06320 Gm13887-201ENSMUST00000119009 344 ntBASIC2.56□□□□□ -2
P06320 Gm14521-201ENSMUST00000119545 350 ntBASIC2.56□□□□□ -2
P06320 Gm11718-201ENSMUST00000119942 537 ntBASIC2.56□□□□□ -2
P06320 Gm14768-201ENSMUST00000122126 678 ntBASIC2.56□□□□□ -2
P06320 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC2.56□□□□□ -2
P06320 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm22895-201ENSMUST00000157508 308 ntBASIC2.56□□□□□ -2
P06320 Gm22312-201ENSMUST00000158005 130 ntBASIC2.56□□□□□ -2
P06320 Gm8837-201ENSMUST00000161037 1107 ntBASIC2.56□□□□□ -2
P06320 Gm3531-201ENSMUST00000162698 489 ntBASIC2.56□□□□□ -2
P06320 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC2.56□□□□□ -2
P06320 Gm17109-201ENSMUST00000163985 358 ntBASIC2.56□□□□□ -2
P06320 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
P06320 Gm27960-201ENSMUST00000183445 184 ntBASIC2.56□□□□□ -2
P06320 Gm27940-201ENSMUST00000184449 98 ntBASIC2.56□□□□□ -2
P06320 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm29332-201ENSMUST00000190829 227 ntBASIC2.56□□□□□ -2
P06320 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC2.56□□□□□ -2
P06320 Gm43601-201ENSMUST00000196294 945 ntBASIC2.56□□□□□ -2
P06320 Gm7838-201ENSMUST00000203221 1189 ntBASIC2.56□□□□□ -2
P06320 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm44138-201ENSMUST00000204939 271 ntBASIC2.56□□□□□ -2
P06320 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC2.56□□□□□ -2
P06320 Gm45499-201ENSMUST00000211656 280 ntBASIC2.56□□□□□ -2
P06320 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC2.56□□□□□ -2
P06320 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC2.56□□□□□ -2
P06320 CT025598.1-201ENSMUST00000225140 427 ntBASIC2.56□□□□□ -2
P06320 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC2.56□□□□□ -2
P06320 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm23464-201ENSMUST00000083145 147 ntBASIC2.56□□□□□ -2
P06320 Gm7381-201ENSMUST00000098958 300 ntBASIC2.56□□□□□ -2
P06320 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
P06320 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
P06320 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC2.56□□□□□ -2
P06320 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
P06320 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
P06320 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
P06320 Gm43197-201ENSMUST00000201493 2583 ntBASIC2.55□□□□□ -2
P06320 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P06320 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P06320 Gm14388-201ENSMUST00000118119 477 ntBASIC2.55□□□□□ -2
P06320 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm6797-201ENSMUST00000119440 512 ntBASIC2.55□□□□□ -2
P06320 Gm15377-201ENSMUST00000119594 246 ntBASIC2.55□□□□□ -2
P06320 Gm13537-201ENSMUST00000120467 267 ntBASIC2.55□□□□□ -2
P06320 Gm13677-201ENSMUST00000120739 595 ntBASIC2.55□□□□□ -2
P06320 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC2.55□□□□□ -2
P06320 Gm22106-201ENSMUST00000122544 127 ntBASIC2.55□□□□□ -2
P06320 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC2.55□□□□□ -2
P06320 Gm2892-201ENSMUST00000145537 711 ntBASIC2.55□□□□□ -2
P06320 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC2.55□□□□□ -2
P06320 Gm22084-201ENSMUST00000157585 105 ntBASIC2.55□□□□□ -2
P06320 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm27896-201ENSMUST00000175162 317 ntBASIC2.55□□□□□ -2
P06320 Gm9320-201ENSMUST00000184151 473 ntBASIC2.55□□□□□ -2
P06320 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC2.55□□□□□ -2
P06320 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC2.55□□□□□ -2
P06320 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC2.55□□□□□ -2
P06320 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC2.55□□□□□ -2
P06320 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC2.55□□□□□ -2
P06320 Gm37268-201ENSMUST00000192254 2614 ntBASIC2.55□□□□□ -2
P06320 Gm18382-201ENSMUST00000194394 582 ntBASIC2.55□□□□□ -2
P06320 Gm43382-201ENSMUST00000198954 838 ntBASIC2.55□□□□□ -2
P06320 Gm42652-201ENSMUST00000199073 614 ntBASIC2.55□□□□□ -2
P06320 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC2.55□□□□□ -2
P06320 Gm44371-201ENSMUST00000204148 467 ntBASIC2.55□□□□□ -2
P06320 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC2.55□□□□□ -2
P06320 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.55□□□□□ -2
P06320 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P06320 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
P06320 AC131677.1-201ENSMUST00000218721 535 ntBASIC2.55□□□□□ -2
P06320 Gm9616-201ENSMUST00000221154 781 ntBASIC2.55□□□□□ -2
P06320 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC2.55□□□□□ -2
P06320 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC2.55□□□□□ -2
P06320 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.55□□□□□ -2
P06320 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC2.55□□□□□ -2
P06320 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC2.55□□□□□ -2
P06320 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P06320 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
P06320 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC2.55□□□□□ -2
P06320 Mir31-201ENSMUST00000083474 106 ntBASIC2.55□□□□□ -2
P06320 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC2.55□□□□□ -2
P06320 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms