Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm23963-201ENSMUST00000179603 77 ntBASIC2.37□□□□□ -2.03
Herc1E9PZP8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Gm43155-201ENSMUST00000202661 494 ntBASIC2.37□□□□□ -2.03
Herc1E9PZP8 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Herc1E9PZP8 Xpo7-203ENSMUST00000226448 3663 ntBASIC2.37□□□□□ -2.03
Herc1E9PZP8 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm20656-201ENSMUST00000176925 518 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm18877-201ENSMUST00000207706 539 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm8672-201ENSMUST00000221200 332 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm23510-201ENSMUST00000083083 163 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm37639-201ENSMUST00000191623 2785 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm43654-201ENSMUST00000200664 3417 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm45555-201ENSMUST00000210028 2602 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm6274-201ENSMUST00000118173 797 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm14560-201ENSMUST00000118672 375 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm11699-201ENSMUST00000119016 401 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm23668-201ENSMUST00000157465 111 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm23318-201ENSMUST00000158000 108 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm45400-201ENSMUST00000211603 653 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm7834-201ENSMUST00000117560 437 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm16218-201ENSMUST00000155424 388 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm23048-201ENSMUST00000157237 129 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Mir6996-201ENSMUST00000183922 61 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm32222-201ENSMUST00000203296 298 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm17838-201ENSMUST00000205872 876 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm22249-201ENSMUST00000082485 136 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm17137-201ENSMUST00000164106 4371 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm43577-201ENSMUST00000197090 3344 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm44739-201ENSMUST00000205294 1426 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm31258-201ENSMUST00000194532 3297 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm17075-201ENSMUST00000171924 670 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm27532-201ENSMUST00000183726 113 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm37010-201ENSMUST00000194539 1704 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm45513-201ENSMUST00000210228 376 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Herc1E9PZP8 AC174797.3-203ENSMUST00000225749 2078 ntBASIC2.36□□□□□ -2.03
Herc1E9PZP8 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Herc1E9PZP8 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
Herc1E9PZP8 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.35□□□□□ -2.03
Herc1E9PZP8 Gm38067-201ENSMUST00000192346 1911 ntBASIC2.35□□□□□ -2.03
Herc1E9PZP8 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Herc1E9PZP8 Gm11321-201ENSMUST00000121257 902 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms