Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Ptgds-202ENSMUST00000114251 830 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm14202-201ENSMUST00000120121 311 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm14414-201ENSMUST00000120833 573 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm8840-201ENSMUST00000122454 386 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Mir1900-201ENSMUST00000122714 78 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm24647-201ENSMUST00000157112 113 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm22035-201ENSMUST00000157284 228 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm23585-201ENSMUST00000157656 102 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm24210-201ENSMUST00000158263 133 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm25601-201ENSMUST00000158356 105 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm24502-201ENSMUST00000158453 105 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm22206-201ENSMUST00000158612 116 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm17304-201ENSMUST00000167618 69 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Uba52-ps-201ENSMUST00000183770 379 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b1-201ENSMUST00000183812 216 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b4-201ENSMUST00000184171 215 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm12728-202ENSMUST00000184254 234 ntAPPRIS P5 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm27419-201ENSMUST00000184576 109 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm12728-203ENSMUST00000185012 234 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b2-201ENSMUST00000185073 215 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm21181-201ENSMUST00000186249 330 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm28416-201ENSMUST00000188334 292 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm3745-201ENSMUST00000193773 421 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b2-202ENSMUST00000196353 216 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm22897-202ENSMUST00000197782 127 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b3-202ENSMUST00000198628 215 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b4-202ENSMUST00000199460 216 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b1-202ENSMUST00000200547 215 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm43441-201ENSMUST00000201458 205 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm43459-201ENSMUST00000202093 331 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm43501-201ENSMUST00000202513 107 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm44650-201ENSMUST00000206929 194 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm44824-201ENSMUST00000207021 229 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm2614-201ENSMUST00000223227 403 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm6109-201ENSMUST00000223297 348 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Mif-ps7-201ENSMUST00000223357 327 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 AC238940.2-201ENSMUST00000224202 330 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 AC165265.1-201ENSMUST00000225929 439 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 AC137117.3-201ENSMUST00000226265 485 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm5590-201ENSMUST00000059110 345 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm23623-201ENSMUST00000082461 107 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm22978-201ENSMUST00000082607 160 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm26202-201ENSMUST00000082910 65 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm23723-201ENSMUST00000082996 132 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm26326-201ENSMUST00000083070 129 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Snora65-201ENSMUST00000083190 130 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Mir130b-201ENSMUST00000083638 82 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm26166-201ENSMUST00000083788 107 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Rnu3b3-201ENSMUST00000093738 216 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Hdac9-207ENSMUST00000210724 2811 ntTSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Gm37621-201ENSMUST00000194716 5531 ntBASIC1.21□□□□□ -2.22
Gm4559A4IF42 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Gm4559A4IF42 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms