Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm37601-201ENSMUST00000194922 394 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a4A2AX52 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.48□□□□□ -1.85
Col6a4A2AX52 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a4A2AX52 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm9043-201ENSMUST00000119677 314 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm38234-201ENSMUST00000195204 421 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm11212-201ENSMUST00000118337 618 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm15034-201ENSMUST00000120043 349 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm12691-201ENSMUST00000120186 456 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm7618-201ENSMUST00000121643 171 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm3160-201ENSMUST00000128343 607 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm37164-201ENSMUST00000192809 637 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm37095-201ENSMUST00000195421 205 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm44754-201ENSMUST00000208155 400 ntBASIC3.47□□□□□ -1.85
Col6a4A2AX52 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a4A2AX52 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC3.46□□□□□ -1.85
Col6a4A2AX52 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Col6a4A2AX52 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Col6a4A2AX52 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Col6a4A2AX52 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Col6a4A2AX52 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm25727-201ENSMUST00000104522 131 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm14739-201ENSMUST00000120424 802 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm4479-201ENSMUST00000178807 171 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Mir7578-201ENSMUST00000183455 82 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm19637-201ENSMUST00000185933 579 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm29634-201ENSMUST00000188467 696 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm28699-201ENSMUST00000189193 696 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm44946-201ENSMUST00000208425 572 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm37244-201ENSMUST00000191748 1981 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Gm46199-201ENSMUST00000220373 1693 ntBASIC3.46□□□□□ -1.86
Col6a4A2AX52 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a4A2AX52 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms