Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm11212-201ENSMUST00000118337 618 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm22859-201ENSMUST00000174978 122 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm39197-201ENSMUST00000212069 457 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Gm18016-201ENSMUST00000216119 801 ntBASIC4.28□□□□□ -1.73
Scn1aA2APX8 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.28□□□□□ -1.73
Scn1aA2APX8 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm14365-201ENSMUST00000117535 587 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm15212-201ENSMUST00000122403 466 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm24441-201ENSMUST00000157235 281 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Mir6345-201ENSMUST00000184286 128 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Mir129b-201ENSMUST00000197461 65 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm43717-201ENSMUST00000198684 310 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm17829-201ENSMUST00000219782 344 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1aA2APX8 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1aA2APX8 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm15364-201ENSMUST00000119618 585 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm25177-201ENSMUST00000122634 117 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm21990-201ENSMUST00000124692 383 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm25369-201ENSMUST00000158848 132 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm16290-201ENSMUST00000161175 474 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm18547-201ENSMUST00000192439 811 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm45727-201ENSMUST00000212886 572 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm45733-201ENSMUST00000212988 437 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm7099-201ENSMUST00000080066 554 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm14716-201ENSMUST00000120138 718 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm22398-201ENSMUST00000174941 125 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm22857-201ENSMUST00000174969 134 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm25731-201ENSMUST00000175167 125 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm43559-201ENSMUST00000198755 466 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 Gm7468-201ENSMUST00000203900 652 ntBASIC4.26□□□□□ -1.73
Scn1aA2APX8 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1aA2APX8 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm23228-201ENSMUST00000157296 270 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm27834-201ENSMUST00000183427 125 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm28975-201ENSMUST00000186412 686 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm29774-201ENSMUST00000219270 436 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.25□□□□□ -1.73
Scn1aA2APX8 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1aA2APX8 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Scn1aA2APX8 Gm14605-201ENSMUST00000120599 268 ntBASIC4.24□□□□□ -1.73
Scn1aA2APX8 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.24□□□□□ -1.73
Scn1aA2APX8 Gm16566-201ENSMUST00000160387 910 ntBASIC4.24□□□□□ -1.73
Scn1aA2APX8 Gm44099-201ENSMUST00000203299 112 ntBASIC4.24□□□□□ -1.73
Scn1aA2APX8 Gm20997-201ENSMUST00000205148 231 ntBASIC4.24□□□□□ -1.73
Scn1aA2APX8 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms