Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb2S4R1M3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb2S4R1M3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
H2afb2S4R1M3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Gm29257-201ENSMUST00000186115 639 ntBASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H2afb2S4R1M3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.52■□□□□ 0.4
H2afb2S4R1M3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H2afb2S4R1M3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Trmt13-210ENSMUST00000198454 880 ntBASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
H2afb2S4R1M3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Gm18666-201ENSMUST00000190039 958 ntBASIC17.5■□□□□ 0.39
H2afb2S4R1M3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afb2S4R1M3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms