Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb3S4R1G7 Gm10849-201ENSMUST00000100397 618 ntBASIC15.77■□□□□ 0.12
H2afb3S4R1G7 Gm2399-201ENSMUST00000104944 225 ntBASIC15.77■□□□□ 0.12
H2afb3S4R1G7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb3S4R1G7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb3S4R1G7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb3S4R1G7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb3S4R1G7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Gm26571-201ENSMUST00000181399 666 ntBASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2afb3S4R1G7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Gm8495-201ENSMUST00000188740 694 ntBASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Gm38285-201ENSMUST00000192928 922 ntBASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
H2afb3S4R1G7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2afb3S4R1G7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms