Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nr1h3Q9Z0Y9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm10418-201ENSMUST00000100943 576 ntBASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nr1h3Q9Z0Y9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1h3Q9Z0Y9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1h3Q9Z0Y9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nr1h3Q9Z0Y9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm23634-201ENSMUST00000175071 91 ntBASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Fst-202ENSMUST00000223640 2612 ntBASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nr1h3Q9Z0Y9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Gm18032-201ENSMUST00000222541 538 ntBASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nr1h3Q9Z0Y9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nr1h3Q9Z0Y9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms