Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CcsQ9WU84 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CcsQ9WU84 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CcsQ9WU84 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CcsQ9WU84 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CcsQ9WU84 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.62□□□□□ -0.23
CcsQ9WU84 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.62□□□□□ -0.23
CcsQ9WU84 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CcsQ9WU84 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CcsQ9WU84 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CcsQ9WU84 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.61□□□□□ -0.23
CcsQ9WU84 Gm18671-201ENSMUST00000214826 683 ntBASIC13.61□□□□□ -0.23
CcsQ9WU84 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.61□□□□□ -0.23
CcsQ9WU84 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CcsQ9WU84 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CcsQ9WU84 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gm10033-202ENSMUST00000211874 928 ntBASIC13.6□□□□□ -0.23
CcsQ9WU84 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CcsQ9WU84 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CcsQ9WU84 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.6□□□□□ -0.23
CcsQ9WU84 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
CcsQ9WU84 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.59□□□□□ -0.23
CcsQ9WU84 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.59□□□□□ -0.23
CcsQ9WU84 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CcsQ9WU84 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CcsQ9WU84 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CcsQ9WU84 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CcsQ9WU84 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CcsQ9WU84 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CcsQ9WU84 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms