Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Gm7290-201ENSMUST00000104990 617 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Gm12918-201ENSMUST00000120234 636 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Gm15710-201ENSMUST00000121821 636 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Gm5075-201ENSMUST00000196916 622 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nek3Q9R0A5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nek3Q9R0A5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek3Q9R0A5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nek3Q9R0A5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Flg-201ENSMUST00000050758 1488 ntBASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek3Q9R0A5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek3Q9R0A5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.14■□□□□ 0.66
Nek3Q9R0A5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek3Q9R0A5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms