Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crlf1Q9JM58 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Crlf1Q9JM58 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.06□□□□□ -0.16
Crlf1Q9JM58 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Crlf1Q9JM58 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf1Q9JM58 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Gm10418-201ENSMUST00000100943 576 ntBASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Gm27525-201ENSMUST00000184465 107 ntBASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Gm10566-201ENSMUST00000086739 996 ntBASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.04□□□□□ -0.16
Crlf1Q9JM58 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Gm11452-201ENSMUST00000122376 690 ntBASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Gm10052-201ENSMUST00000168019 960 ntBASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Gm7729-201ENSMUST00000050143 801 ntBASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crlf1Q9JM58 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Crlf1Q9JM58 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf1Q9JM58 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf1Q9JM58 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf1Q9JM58 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.02□□□□□ -0.17
Crlf1Q9JM58 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Crlf1Q9JM58 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Crlf1Q9JM58 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Gm12895-201ENSMUST00000122214 226 ntBASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Crlf1Q9JM58 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms