Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sec61a2Q9JLR1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a2Q9JLR1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a2Q9JLR1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.77■□□□□ 0.12
Sec61a2Q9JLR1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a2Q9JLR1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Gm37856-201ENSMUST00000191634 999 ntBASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Flg-201ENSMUST00000050758 1488 ntBASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a2Q9JLR1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a2Q9JLR1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms