Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cngb3Q9JJZ9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.34■□□□□ 0.37
Cngb3Q9JJZ9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cngb3Q9JJZ9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cngb3Q9JJZ9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cngb3Q9JJZ9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.31■□□□□ 0.36
Cngb3Q9JJZ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cngb3Q9JJZ9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cngb3Q9JJZ9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms