Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubb3Q9ERD7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubb3Q9ERD7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tubb3Q9ERD7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubb3Q9ERD7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tubb3Q9ERD7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tubb3Q9ERD7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tubb3Q9ERD7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tubb3Q9ERD7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubb3Q9ERD7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubb3Q9ERD7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubb3Q9ERD7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms