Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Gm11249-201ENSMUST00000117071 859 ntBASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tlr9Q9EQU3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tlr9Q9EQU3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.37■□□□□ 0.53
Tlr9Q9EQU3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.36■□□□□ 0.53
Tlr9Q9EQU3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr9Q9EQU3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr9Q9EQU3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr9Q9EQU3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.33■□□□□ 0.52
Tlr9Q9EQU3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms