Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Col4a3bpQ9EQG9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.08■□□□□ 0.81
Col4a3bpQ9EQG9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Col4a3bpQ9EQG9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.07■□□□□ 0.8
Col4a3bpQ9EQG9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Mir2861-201ENSMUST00000175539 82 ntBASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col4a3bpQ9EQG9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Gm10418-201ENSMUST00000100943 576 ntBASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Gm11249-201ENSMUST00000117071 859 ntBASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Col4a3bpQ9EQG9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm11927-201ENSMUST00000118472 759 ntBASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Col4a3bpQ9EQG9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col4a3bpQ9EQG9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms