Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf1Q9EPU0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upf1Q9EPU0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Upf1Q9EPU0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upf1Q9EPU0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Upf1Q9EPU0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20■□□□□ 0.79
Upf1Q9EPU0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Rprl3-201ENSMUST00000157400 290 ntBASIC20■□□□□ 0.79
Upf1Q9EPU0 Gm25911-201ENSMUST00000157621 56 ntBASIC20■□□□□ 0.79
Upf1Q9EPU0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 AC090659.1-201ENSMUST00000224334 768 ntBASIC20■□□□□ 0.79
Upf1Q9EPU0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Upf1Q9EPU0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Gm14140-201ENSMUST00000119999 995 ntBASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Upf1Q9EPU0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Upf1Q9EPU0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Upf1Q9EPU0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Gm15590-201ENSMUST00000078419 552 ntBASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.96■□□□□ 0.79
Upf1Q9EPU0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Upf1Q9EPU0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.95■□□□□ 0.78
Upf1Q9EPU0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Gm27867-201ENSMUST00000184778 125 ntBASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Gm6089-201ENSMUST00000197666 938 ntBASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Upf1Q9EPU0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.94■□□□□ 0.78
Upf1Q9EPU0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms