Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Odf3b-204ENSMUST00000227834 930 ntBASIC19.76■□□□□ 0.75
Smco2Q9DA21 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smco2Q9DA21 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.75■□□□□ 0.75
Smco2Q9DA21 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.75■□□□□ 0.75
Smco2Q9DA21 Timm23-208ENSMUST00000226683 750 ntBASIC19.75■□□□□ 0.75
Smco2Q9DA21 Gm9987-201ENSMUST00000069768 567 ntBASIC19.75■□□□□ 0.75
Smco2Q9DA21 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smco2Q9DA21 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smco2Q9DA21 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
Smco2Q9DA21 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Gm43799-201ENSMUST00000201845 579 ntBASIC19.73■□□□□ 0.75
Smco2Q9DA21 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Gm30025-201ENSMUST00000218555 728 ntBASIC19.73■□□□□ 0.75
Smco2Q9DA21 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smco2Q9DA21 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.72■□□□□ 0.75
Smco2Q9DA21 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Gm6433-201ENSMUST00000118634 875 ntBASIC19.72■□□□□ 0.75
Smco2Q9DA21 Gm11643-201ENSMUST00000119578 864 ntBASIC19.72■□□□□ 0.75
Smco2Q9DA21 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smco2Q9DA21 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smco2Q9DA21 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.72■□□□□ 0.75
Smco2Q9DA21 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.72■□□□□ 0.75
Smco2Q9DA21 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smco2Q9DA21 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms