Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc7Q9D541 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Gm11249-201ENSMUST00000117071 859 ntBASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc7Q9D541 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc7Q9D541 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc7Q9D541 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Ccdc7Q9D541 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc7Q9D541 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc7Q9D541 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc7Q9D541 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Gm12896-201ENSMUST00000118430 226 ntBASIC20.48■□□□□ 0.87
Ccdc7Q9D541 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc7Q9D541 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Gm6576-201ENSMUST00000169678 883 ntBASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc7Q9D541 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc7Q9D541 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms