Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps33aQ9D2N9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps33aQ9D2N9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps33aQ9D2N9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps33aQ9D2N9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vps33aQ9D2N9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps33aQ9D2N9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.56■□□□□ 0.56
Vps33aQ9D2N9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vps33aQ9D2N9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms